BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G11LP1|AL425930
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1431 1629 0.0
>3x_Contig1431
Length = 10954
Score = 1629 bits (821), Expect = 0.0
Identities = 829/831 (99%), Gaps = 1/831 (0%)
Strand = Plus / Minus
Query: 1 acgaagacttatgggatcaacaaagagctgagcaaactcaaagttctgtaagattttgct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4042 acgaagacttatgggatcaacaaagagctgagcaaactcaaagttctg-aagattttgct 3984
Query: 61 aatatttcctcgccaagtattacgcataatacgactatcacgtctggattaaccagtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 aatatttcctcgccaagtattacgcataatacgactatcacgtctggattaaccagtcct 3924
Query: 121 tatttaatggctggtcagctaacctcaaatacgactgctaatactggaaattcatcgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3923 tatttaatggctggtcagctaacctcaaatacgactgctaatactggaaattcatcgact 3864
Query: 181 ggttcgaaaacactatcaactcaaggaggagaatattttggcctggatcctaagtwcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3863 ggttcgaaaacactatcaactcaaggaggagaatattttggcctggatcctaagttcatg 3804
Query: 241 agtaatcgtatttgatcttcactgatcattctccaaagaaattcgtcgactgtgtagtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3803 agtaatcgtatttgatcttcactgatcattctccaaagaaattcgtcgactgtgtagtat 3744
Query: 301 tttttatgtagatctttagtccttcgtctatctgtattattatcattaatattataatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3743 tttttatgtagatctttagtccttcgtctatctgtattattatcattaatattataatct 3684
Query: 361 tcaaatcatctgagaacactcatatacactgggagacgctatttttgaaggctatataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3683 tcaaatcatctgagaacactcatatacactgggagacgctatttttgaaggctatataga 3624
Query: 421 taactgtaaaaacacgttgtgtgaaagaatttggttgaaggttcaagtagattttttgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3623 taactgtaaaaacacgttgtgtgaaagaatttggttgaaggttcaagtagattttttgta 3564
Query: 481 acgatatataacagatttatcaaccctgttcatgacatttttccatggcttcttttatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3563 acgatatataacagatttatcaaccctgttcatgacatttttccatggcttcttttatta 3504
Query: 541 attgactacctttagggtctaggttcattgcaatagtatattgattcattgcatcttgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3503 attgactacctttagggtctaggttcattgcaatagtatattgattcattgcatcttgct 3444
Query: 601 tcttacccacaatttggtacaggttaccaagcaaaaagtgcacatgagcttcatcagggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3443 tcttacccacaatttggtacaggttaccaagcaaaaagtgcacatgagcttcatcagggg 3384
Query: 661 taagtgattctaatctttcaaaattatgtagcgcagaagaatactgtcccatgttcaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3383 taagtgattctaatctttcaaaattatgtagcgcagaagaatactgtcccatgttcaata 3324
Query: 721 gaagttgtgatttcttgaacaatgctaaagacgagtttggttgtaactcagttgctaatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3323 gaagttgtgatttcttgaacaatgctaaagacgagtttggttgtaactcagttgctaatt 3264
Query: 781 cgtagaagttcaaagctctctctggctgctgtaatctttctaacgcaacgc 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3263 cgtagaagttcaaagctctctctggctgctgtaatctttctaacgcaacgc 3213
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6588
Number of Sequences: 1807
Number of extensions: 6588
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)